# RasMol script:
#
# For MS-Windows, LOAD this file at RasMol Command Line window.
#
# For Macintosh, copy this contents and paste to Command Line window.
#
#
# Usage of RasMol commands is summerized in a URL:
#  http://www.osaka-med.ac.jp/deps/med/HomePage/Home.html
#
# A centroid of phenyl ring is added to the file "pln1_bz-cent.pdb".
# 

# Break bonds between centroid and phenyl atoms
unbond 49 19
unbond 49 23
unbond 49 14
unbond 49 15
unbond 49 17
unbond 49 21

# Set bond radius
wireframe 30

# Set colour and ball size of atoms
select carbon
color [238,233,233]
spacefill 0.4
select oxygen
color [240,128,128]
spacefill 0.4
select nitrogen
color [135,206,235]
spacefill 0.4
select hydrogen
color [230,230,250]
spacefill 0.2
select *.CL1
color [143,188,143]
spacefill 0.6
select cen.H1

# Draw hydrogen bonds
bond 4 49
bond 2 6

# Remove additional centroid point from drawing
select cen.h1
cpk 0

zoom 120

# Set project-orientation
reset
rotate x 112
rotate y -36
rotate x 66

background white

# Before next command, you can rotate the molecule.

# Make povray files: fl.inc and fl.pov
#
write povray3 fl

# EOF